Cluster: HRGMv2_4384_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4384
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4384_27 | HRGMv2_4384_27_2 | 2598 | 3440 | - | 3.A.1.1.34 |
| TC | HRGMv2_4384_27 | HRGMv2_4384_27_3 | 3444 | 4367 | - | 3.A.1.1.4 |
| STP | HRGMv2_4384_27 | HRGMv2_4384_27_4 | 4442 | 5908 | - | SBP_bac_1 |
| pfam | HRGMv2_4384_27 | HRGMv2_4384_27_5 | 6272 | 7102 | + | Lactamase_B_2 |
| CAZyme | HRGMv2_4384_27 | HRGMv2_4384_27_6 | 7186 | 10197 | - | GH38 |
| TF | HRGMv2_4384_27 | HRGMv2_4384_27_7 | 10330 | 11217 | - | HTH_AraC |
| TC | HRGMv2_4384_27 | HRGMv2_4384_27_8 | 11440 | 12363 | - | 8.A.5.1.7 |
Gene ID: HRGMv2_4384_27_2
Type: TC
Location: 2598 - 3440 (-)
Type: TC
Location: 2598 - 3440 (-)
Gene ID: HRGMv2_4384_27_3
Type: TC
Location: 3444 - 4367 (-)
Type: TC
Location: 3444 - 4367 (-)
Gene ID: HRGMv2_4384_27_4
Type: STP
Location: 4442 - 5908 (-)
Type: STP
Location: 4442 - 5908 (-)
Gene ID: HRGMv2_4384_27_5
Type: pfam
Location: 6272 - 7102 (+)
Type: pfam
Location: 6272 - 7102 (+)
Gene ID: HRGMv2_4384_27_6
Type: CAZyme
Location: 7186 - 10197 (-)
Type: CAZyme
Location: 7186 - 10197 (-)
Gene ID: HRGMv2_4384_27_7
Type: TF
Location: 10330 - 11217 (-)
Type: TF
Location: 10330 - 11217 (-)
Gene ID: HRGMv2_4384_27_8
Type: TC
Location: 11440 - 12363 (-)
Type: TC
Location: 11440 - 12363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.