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Cluster: HRGMv2_4384_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4384_20 HRGMv2_4384_20_11 17543 20605 + GH141
CAZyme HRGMv2_4384_20 HRGMv2_4384_20_12 20633 24808 + GH141
pfam HRGMv2_4384_20 HRGMv2_4384_20_13 24810 26567 + SLH | SLH | SLH
pfam HRGMv2_4384_20 HRGMv2_4384_20_14 26564 29443 + SLH
CAZyme HRGMv2_4384_20 HRGMv2_4384_20_15 29497 30654 + GH88
CAZyme HRGMv2_4384_20 HRGMv2_4384_20_16 30678 32363 + GH3
CAZyme HRGMv2_4384_20 HRGMv2_4384_20_17 32409 33542 + CE9
peptidase HRGMv2_4384_20 HRGMv2_4384_20_18 33569 34726 + M20.UPD
NULL(UNKNOWN) HRGMv2_4384_20 HRGMv2_4384_20_19 34726 34899 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4384_20 HRGMv2_4384_20_20 34874 35758 + 2.A.115.1.5
Gene ID: HRGMv2_4384_20_11
Type: CAZyme
Location: 17543 - 20605 (+)
Gene ID: HRGMv2_4384_20_12
Type: CAZyme
Location: 20633 - 24808 (+)
Gene ID: HRGMv2_4384_20_13
Type: pfam
Location: 24810 - 26567 (+)
Gene ID: HRGMv2_4384_20_14
Type: pfam
Location: 26564 - 29443 (+)
Gene ID: HRGMv2_4384_20_15
Type: CAZyme
Location: 29497 - 30654 (+)
Gene ID: HRGMv2_4384_20_16
Type: CAZyme
Location: 30678 - 32363 (+)
Gene ID: HRGMv2_4384_20_17
Type: CAZyme
Location: 32409 - 33542 (+)
Gene ID: HRGMv2_4384_20_18
Type: peptidase
Location: 33569 - 34726 (+)
Gene ID: HRGMv2_4384_20_19
Type:
Location: 34726 - 34899 (+)
Gene ID: HRGMv2_4384_20_20
Type: TC
Location: 34874 - 35758 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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