Cluster: HRGMv2_4382_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4382
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_7 | 6978 | 7691 | - | 3.A.1.4.10 |
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_8 | 7696 | 8532 | - | 3.A.1.4.10 |
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_9 | 8525 | 9613 | - | 3.A.1.4.8 |
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_10 | 9622 | 10503 | - | 3.A.1.4.10 |
| pfam | HRGMv2_4382_28 | HRGMv2_4382_28_11 | 10717 | 11913 | - | ANF_receptor | Peripla_BP_6 |
| pfam | HRGMv2_4382_28 | HRGMv2_4382_28_12 | 12378 | 12680 | - | Mn_catalase |
| CAZyme | HRGMv2_4382_28 | HRGMv2_4382_28_13 | 13001 | 15916 | - | CE12 |
| pfam | HRGMv2_4382_28 | HRGMv2_4382_28_14 | 15982 | 18357 | - | aBig_2 |
| CAZyme | HRGMv2_4382_28 | HRGMv2_4382_28_15 | 18441 | 19556 | - | GH105 |
| STP | HRGMv2_4382_28 | HRGMv2_4382_28_16 | 19571 | 21154 | - | SBP_bac_1 |
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_17 | 21214 | 22152 | - | 3.A.1.1.10 |
| TC | HRGMv2_4382_28 | HRGMv2_4382_28_18 | 22149 | 23027 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_4382_28_7
Type: TC
Location: 6978 - 7691 (-)
Type: TC
Location: 6978 - 7691 (-)
Gene ID: HRGMv2_4382_28_8
Type: TC
Location: 7696 - 8532 (-)
Type: TC
Location: 7696 - 8532 (-)
Gene ID: HRGMv2_4382_28_9
Type: TC
Location: 8525 - 9613 (-)
Type: TC
Location: 8525 - 9613 (-)
Gene ID: HRGMv2_4382_28_10
Type: TC
Location: 9622 - 10503 (-)
Type: TC
Location: 9622 - 10503 (-)
Gene ID: HRGMv2_4382_28_11
Type: pfam
Location: 10717 - 11913 (-)
Type: pfam
Location: 10717 - 11913 (-)
Gene ID: HRGMv2_4382_28_12
Type: pfam
Location: 12378 - 12680 (-)
Type: pfam
Location: 12378 - 12680 (-)
Gene ID: HRGMv2_4382_28_13
Type: CAZyme
Location: 13001 - 15916 (-)
Type: CAZyme
Location: 13001 - 15916 (-)
Gene ID: HRGMv2_4382_28_14
Type: pfam
Location: 15982 - 18357 (-)
Type: pfam
Location: 15982 - 18357 (-)
Gene ID: HRGMv2_4382_28_15
Type: CAZyme
Location: 18441 - 19556 (-)
Type: CAZyme
Location: 18441 - 19556 (-)
Gene ID: HRGMv2_4382_28_16
Type: STP
Location: 19571 - 21154 (-)
Type: STP
Location: 19571 - 21154 (-)
Gene ID: HRGMv2_4382_28_17
Type: TC
Location: 21214 - 22152 (-)
Type: TC
Location: 21214 - 22152 (-)
Gene ID: HRGMv2_4382_28_18
Type: TC
Location: 22149 - 23027 (-)
Type: TC
Location: 22149 - 23027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.