Cluster: HRGMv2_4382_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4382
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4382_64 | HRGMv2_4382_64_2 | 2570 | 4213 | - | 3.A.1.117.3 |
| pfam | HRGMv2_4382_64 | HRGMv2_4382_64_3 | 4227 | 4499 | - | PqqD |
| TF | HRGMv2_4382_64 | HRGMv2_4382_64_4 | 4877 | 5761 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4382_64 | HRGMv2_4382_64_5 | 5969 | 7054 | + | GH179 |
| pfam | HRGMv2_4382_64 | HRGMv2_4382_64_6 | 7231 | 7686 | - | ATP-cone | Zn_ribbon_NrdR |
| CAZyme | HRGMv2_4382_64 | HRGMv2_4382_64_7 | 7749 | 10061 | - | CE20 |
| CAZyme | HRGMv2_4382_64 | HRGMv2_4382_64_8 | 10129 | 11427 | - | GH18 |
Gene ID: HRGMv2_4382_64_2
Type: TC
Location: 2570 - 4213 (-)
Type: TC
Location: 2570 - 4213 (-)
Gene ID: HRGMv2_4382_64_3
Type: pfam
Location: 4227 - 4499 (-)
Type: pfam
Location: 4227 - 4499 (-)
Gene ID: HRGMv2_4382_64_4
Type: TF
Location: 4877 - 5761 (-)
Type: TF
Location: 4877 - 5761 (-)
Gene ID: HRGMv2_4382_64_5
Type: CAZyme
Location: 5969 - 7054 (+)
Type: CAZyme
Location: 5969 - 7054 (+)
Gene ID: HRGMv2_4382_64_6
Type: pfam
Location: 7231 - 7686 (-)
Type: pfam
Location: 7231 - 7686 (-)
Gene ID: HRGMv2_4382_64_7
Type: CAZyme
Location: 7749 - 10061 (-)
Type: CAZyme
Location: 7749 - 10061 (-)
Gene ID: HRGMv2_4382_64_8
Type: CAZyme
Location: 10129 - 11427 (-)
Type: CAZyme
Location: 10129 - 11427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.