Cluster: HRGMv2_4382_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4382
- CGC Family ID: CGCFAM_02122
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4382_58 | HRGMv2_4382_58_5 | 3791 | 4855 | - | CE9 |
| pfam | HRGMv2_4382_58 | HRGMv2_4382_58_6 | 4872 | 5585 | - | Glucosamine_iso |
| pfam | HRGMv2_4382_58 | HRGMv2_4382_58_7 | 5629 | 6480 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_4382_58 | HRGMv2_4382_58_8 | 6490 | 7557 | - | GH179 |
| pfam | HRGMv2_4382_58 | HRGMv2_4382_58_9 | 7550 | 8410 | - | AP_endonuc_2 |
| TF | HRGMv2_4382_58 | HRGMv2_4382_58_10 | 8542 | 9447 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4382_58 | HRGMv2_4382_58_11 | 9485 | 12091 | - | 3.A.3.2.21 |
Gene ID: HRGMv2_4382_58_5
Type: CAZyme
Location: 3791 - 4855 (-)
Type: CAZyme
Location: 3791 - 4855 (-)
Gene ID: HRGMv2_4382_58_6
Type: pfam
Location: 4872 - 5585 (-)
Type: pfam
Location: 4872 - 5585 (-)
Gene ID: HRGMv2_4382_58_7
Type: pfam
Location: 5629 - 6480 (-)
Type: pfam
Location: 5629 - 6480 (-)
Gene ID: HRGMv2_4382_58_8
Type: CAZyme
Location: 6490 - 7557 (-)
Type: CAZyme
Location: 6490 - 7557 (-)
Gene ID: HRGMv2_4382_58_9
Type: pfam
Location: 7550 - 8410 (-)
Type: pfam
Location: 7550 - 8410 (-)
Gene ID: HRGMv2_4382_58_10
Type: TF
Location: 8542 - 9447 (+)
Type: TF
Location: 8542 - 9447 (+)
Gene ID: HRGMv2_4382_58_11
Type: TC
Location: 9485 - 12091 (-)
Type: TC
Location: 9485 - 12091 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.