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Cluster: HRGMv2_4382_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4382_49 HRGMv2_4382_49_9 9504 10850 + 2.A.66.1.28
pfam HRGMv2_4382_49 HRGMv2_4382_49_10 10971 12245 + PDZ | Radical_SAM | DUF512 | PDZ_2 | PDZ_6 | Radical_SAM_2
pfam HRGMv2_4382_49 HRGMv2_4382_49_11 12256 13578 + GTP_EFTU | GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | cobW | AIG1 | KH_dom-like
TC HRGMv2_4382_49 HRGMv2_4382_49_12 13602 14228 + 9.B.31.1.2
pfam HRGMv2_4382_49 HRGMv2_4382_49_13 14255 15268 + NAD_Gly3P_dh_N | ApbA | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TF HRGMv2_4382_49 HRGMv2_4382_49_14 15321 16169 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4382_49 HRGMv2_4382_49_15 16329 19412 + GH106
Gene ID: HRGMv2_4382_49_9
Type: TC
Location: 9504 - 10850 (+)
Gene ID: HRGMv2_4382_49_10
Type: pfam
Location: 10971 - 12245 (+)
Gene ID: HRGMv2_4382_49_11
Type: pfam
Location: 12256 - 13578 (+)
Gene ID: HRGMv2_4382_49_12
Type: TC
Location: 13602 - 14228 (+)
Gene ID: HRGMv2_4382_49_13
Type: pfam
Location: 14255 - 15268 (+)
Gene ID: HRGMv2_4382_49_14
Type: TF
Location: 15321 - 16169 (-)
Gene ID: HRGMv2_4382_49_15
Type: CAZyme
Location: 16329 - 19412 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Ructibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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