Cluster: HRGMv2_4382_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4382
- CGC Family ID: CGCFAM_02495
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4382_1 | HRGMv2_4382_1_21 | 36943 | 38523 | + | GH31_19 |
| TF | HRGMv2_4382_1 | HRGMv2_4382_1_22 | 38549 | 40087 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4382_1 | HRGMv2_4382_1_23 | 40100 | 40375 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4382_1 | HRGMv2_4382_1_24 | 40383 | 42155 | - | 9.B.33.1.1 |
| pfam | HRGMv2_4382_1 | HRGMv2_4382_1_25 | 42365 | 43834 | + | SBP_bac_1 | DUF3502 |
| TC | HRGMv2_4382_1 | HRGMv2_4382_1_26 | 43873 | 44838 | + | 3.A.1.1.10 |
| TC | HRGMv2_4382_1 | HRGMv2_4382_1_27 | 44852 | 45727 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4382_1_21
Type: CAZyme
Location: 36943 - 38523 (+)
Type: CAZyme
Location: 36943 - 38523 (+)
Gene ID: HRGMv2_4382_1_22
Type: TF
Location: 38549 - 40087 (-)
Type: TF
Location: 38549 - 40087 (-)
Gene ID: HRGMv2_4382_1_23
Type:
Location: 40100 - 40375 (-)
Type:
Location: 40100 - 40375 (-)
Gene ID: HRGMv2_4382_1_24
Type: TC
Location: 40383 - 42155 (-)
Type: TC
Location: 40383 - 42155 (-)
Gene ID: HRGMv2_4382_1_25
Type: pfam
Location: 42365 - 43834 (+)
Type: pfam
Location: 42365 - 43834 (+)
Gene ID: HRGMv2_4382_1_26
Type: TC
Location: 43873 - 44838 (+)
Type: TC
Location: 43873 - 44838 (+)
Gene ID: HRGMv2_4382_1_27
Type: TC
Location: 44852 - 45727 (+)
Type: TC
Location: 44852 - 45727 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.