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Cluster: HRGMv2_4381_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4381_7 HRGMv2_4381_7_25 29905 31125 - GT4
CAZyme HRGMv2_4381_7 HRGMv2_4381_7_26 31150 32271 - GT4
TC HRGMv2_4381_7 HRGMv2_4381_7_27 32275 33930 - 2.A.66.1.40
pfam HRGMv2_4381_7 HRGMv2_4381_7_28 33972 35141 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_4381_7 HRGMv2_4381_7_29 35168 35866 - 9.B.18.1.2
peptidase HRGMv2_4381_7 HRGMv2_4381_7_30 36168 36722 - S26.UPA
CAZyme HRGMv2_4381_7 HRGMv2_4381_7_31 36903 43211 - CE8
Gene ID: HRGMv2_4381_7_25
Type: CAZyme
Location: 29905 - 31125 (-)
Gene ID: HRGMv2_4381_7_26
Type: CAZyme
Location: 31150 - 32271 (-)
Gene ID: HRGMv2_4381_7_27
Type: TC
Location: 32275 - 33930 (-)
Gene ID: HRGMv2_4381_7_28
Type: pfam
Location: 33972 - 35141 (-)
Gene ID: HRGMv2_4381_7_29
Type: TC
Location: 35168 - 35866 (-)
Gene ID: HRGMv2_4381_7_30
Type: peptidase
Location: 36168 - 36722 (-)
Gene ID: HRGMv2_4381_7_31
Type: CAZyme
Location: 36903 - 43211 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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