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Cluster: HRGMv2_4381_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4381_103 HRGMv2_4381_103_1 2 496 + 3.A.1.1.10
TC HRGMv2_4381_103 HRGMv2_4381_103_2 513 1406 + 3.A.1.1.9
STP HRGMv2_4381_103 HRGMv2_4381_103_3 1449 3191 + SBP_bac_1
CAZyme HRGMv2_4381_103 HRGMv2_4381_103_4 3309 4199 + CE8
CAZyme HRGMv2_4381_103 HRGMv2_4381_103_5 4347 5825 + GH28
Gene ID: HRGMv2_4381_103_1
Type: TC
Location: 2 - 496 (+)
Gene ID: HRGMv2_4381_103_2
Type: TC
Location: 513 - 1406 (+)
Gene ID: HRGMv2_4381_103_3
Type: STP
Location: 1449 - 3191 (+)
Gene ID: HRGMv2_4381_103_4
Type: CAZyme
Location: 3309 - 4199 (+)
Gene ID: HRGMv2_4381_103_5
Type: CAZyme
Location: 4347 - 5825 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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