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Cluster: HRGMv2_4381_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4381_73 HRGMv2_4381_73_1 2 2095 + CE20
TC HRGMv2_4381_73 HRGMv2_4381_73_2 2426 3754 + 3.D.6.1.2
TC HRGMv2_4381_73 HRGMv2_4381_73_3 3771 4766 + 3.D.6.1.2
TC HRGMv2_4381_73 HRGMv2_4381_73_4 4766 5551 + 3.D.6.1.2
TC HRGMv2_4381_73 HRGMv2_4381_73_5 5548 6192 + 3.D.6.1.2
TC HRGMv2_4381_73 HRGMv2_4381_73_6 6194 6787 + 3.D.6.1.2
TC HRGMv2_4381_73 HRGMv2_4381_73_7 6806 7768 + 3.D.6.1.2
pfam HRGMv2_4381_73 HRGMv2_4381_73_8 7812 8234 + HIT
peptidase HRGMv2_4381_73 HRGMv2_4381_73_9 8363 9337 + C59.951
TC HRGMv2_4381_73 HRGMv2_4381_73_10 9377 10729 - 2.A.37.2.2
Gene ID: HRGMv2_4381_73_1
Type: CAZyme
Location: 2 - 2095 (+)
Gene ID: HRGMv2_4381_73_2
Type: TC
Location: 2426 - 3754 (+)
Gene ID: HRGMv2_4381_73_3
Type: TC
Location: 3771 - 4766 (+)
Gene ID: HRGMv2_4381_73_4
Type: TC
Location: 4766 - 5551 (+)
Gene ID: HRGMv2_4381_73_5
Type: TC
Location: 5548 - 6192 (+)
Gene ID: HRGMv2_4381_73_6
Type: TC
Location: 6194 - 6787 (+)
Gene ID: HRGMv2_4381_73_7
Type: TC
Location: 6806 - 7768 (+)
Gene ID: HRGMv2_4381_73_8
Type: pfam
Location: 7812 - 8234 (+)
Gene ID: HRGMv2_4381_73_9
Type: peptidase
Location: 8363 - 9337 (+)
Gene ID: HRGMv2_4381_73_10
Type: TC
Location: 9377 - 10729 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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