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Cluster: HRGMv2_4381_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4381_39 HRGMv2_4381_39_4 2134 8214 + GH3
TC HRGMv2_4381_39 HRGMv2_4381_39_5 8301 9071 - 3.A.1.16.1
TC HRGMv2_4381_39 HRGMv2_4381_39_6 9071 9832 - 3.A.1.16.2
TC HRGMv2_4381_39 HRGMv2_4381_39_7 9924 10868 - 3.A.1.17.12
Gene ID: HRGMv2_4381_39_4
Type: CAZyme
Location: 2134 - 8214 (+)
Gene ID: HRGMv2_4381_39_5
Type: TC
Location: 8301 - 9071 (-)
Gene ID: HRGMv2_4381_39_6
Type: TC
Location: 9071 - 9832 (-)
Gene ID: HRGMv2_4381_39_7
Type: TC
Location: 9924 - 10868 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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