Cluster: HRGMv2_4380_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4380_4 | HRGMv2_4380_4_7 | 5523 | 8006 | + | 3.A.11.3.1 |
| TF | HRGMv2_4380_4 | HRGMv2_4380_4_8 | 8072 | 8371 | - | HTH_3 |
| TC | HRGMv2_4380_4 | HRGMv2_4380_4_9 | 8662 | 10023 | + | 9.A.40.2.2 |
| pfam | HRGMv2_4380_4 | HRGMv2_4380_4_10 | 10118 | 11590 | + | SLH | SLH |
| CAZyme | HRGMv2_4380_4 | HRGMv2_4380_4_11 | 11830 | 16359 | + | CBM62 | GH141 |
Gene ID: HRGMv2_4380_4_7
Type: TC
Location: 5523 - 8006 (+)
Type: TC
Location: 5523 - 8006 (+)
Gene ID: HRGMv2_4380_4_8
Type: TF
Location: 8072 - 8371 (-)
Type: TF
Location: 8072 - 8371 (-)
Gene ID: HRGMv2_4380_4_9
Type: TC
Location: 8662 - 10023 (+)
Type: TC
Location: 8662 - 10023 (+)
Gene ID: HRGMv2_4380_4_10
Type: pfam
Location: 10118 - 11590 (+)
Type: pfam
Location: 10118 - 11590 (+)
Gene ID: HRGMv2_4380_4_11
Type: CAZyme
Location: 11830 - 16359 (+)
Type: CAZyme
Location: 11830 - 16359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.