Cluster: HRGMv2_4380_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_2 | HRGMv2_4380_2_22 | 22915 | 29004 | - | CBM62 | GH43_19 | GH43_34 | GH51_2 |
| CAZyme | HRGMv2_4380_2 | HRGMv2_4380_2_23 | 29027 | 34963 | - | GH141 |
| TF | HRGMv2_4380_2 | HRGMv2_4380_2_24 | 35124 | 35951 | + | 0035607 | 0036286 |
| TC | HRGMv2_4380_2 | HRGMv2_4380_2_25 | 36184 | 38115 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_4380_2_22
Type: CAZyme
Location: 22915 - 29004 (-)
Type: CAZyme
Location: 22915 - 29004 (-)
Gene ID: HRGMv2_4380_2_23
Type: CAZyme
Location: 29027 - 34963 (-)
Type: CAZyme
Location: 29027 - 34963 (-)
Gene ID: HRGMv2_4380_2_24
Type: TF
Location: 35124 - 35951 (+)
Type: TF
Location: 35124 - 35951 (+)
Gene ID: HRGMv2_4380_2_25
Type: TC
Location: 36184 - 38115 (-)
Type: TC
Location: 36184 - 38115 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.