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Cluster: HRGMv2_4380_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4380_1 HRGMv2_4380_1_162 239983 241095 - 3.A.1.1.22
pfam HRGMv2_4380_1 HRGMv2_4380_1_163 241785 242825 + Semialdhyde_dh | Semialdhyde_dhC | Semialdhyde_dhC_1
pfam HRGMv2_4380_1 HRGMv2_4380_1_164 242890 243759 + AA_kinase
TC HRGMv2_4380_1 HRGMv2_4380_1_165 243944 245335 - 2.A.66.1.7
STP HRGMv2_4380_1 HRGMv2_4380_1_166 245376 245939 - TetR_N
TC HRGMv2_4380_1 HRGMv2_4380_1_167 246155 248032 - 3.A.3.6.16
pfam HRGMv2_4380_1 HRGMv2_4380_1_168 248239 248514 - Trns_repr_metal
TF HRGMv2_4380_1 HRGMv2_4380_1_169 248816 249850 + LacI
CAZyme HRGMv2_4380_1 HRGMv2_4380_1_170 249937 254067 + GH95
Gene ID: HRGMv2_4380_1_162
Type: TC
Location: 239983 - 241095 (-)
Gene ID: HRGMv2_4380_1_163
Type: pfam
Location: 241785 - 242825 (+)
Gene ID: HRGMv2_4380_1_164
Type: pfam
Location: 242890 - 243759 (+)
Gene ID: HRGMv2_4380_1_165
Type: TC
Location: 243944 - 245335 (-)
Gene ID: HRGMv2_4380_1_166
Type: STP
Location: 245376 - 245939 (-)
Gene ID: HRGMv2_4380_1_167
Type: TC
Location: 246155 - 248032 (-)
Gene ID: HRGMv2_4380_1_168
Type: pfam
Location: 248239 - 248514 (-)
Gene ID: HRGMv2_4380_1_169
Type: TF
Location: 248816 - 249850 (+)
Gene ID: HRGMv2_4380_1_170
Type: CAZyme
Location: 249937 - 254067 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Roslinia
→
Species
Roslinia caecavium

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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