Cluster: HRGMv2_4380_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- CGC Family ID: CGCFAM_01905
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_1 | HRGMv2_4380_1_152 | 227023 | 227976 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4380_1 | HRGMv2_4380_1_153 | 227973 | 230207 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | HRGMv2_4380_1 | HRGMv2_4380_1_154 | 230459 | 231787 | - | S1_8 |
| TC | HRGMv2_4380_1 | HRGMv2_4380_1_155 | 232097 | 235177 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_4380_1_152
Type: CAZyme
Location: 227023 - 227976 (+)
Type: CAZyme
Location: 227023 - 227976 (+)
Gene ID: HRGMv2_4380_1_153
Type:
Location: 227973 - 230207 (+)
Type:
Location: 227973 - 230207 (+)
Gene ID: HRGMv2_4380_1_154
Type: sulfatase
Location: 230459 - 231787 (-)
Type: sulfatase
Location: 230459 - 231787 (-)
Gene ID: HRGMv2_4380_1_155
Type: TC
Location: 232097 - 235177 (-)
Type: TC
Location: 232097 - 235177 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.