Cluster: HRGMv2_4380_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_22 | HRGMv2_4380_22_14 | 17045 | 18346 | - | GH18 |
| TF | HRGMv2_4380_22 | HRGMv2_4380_22_15 | 18561 | 19460 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4380_22 | HRGMv2_4380_22_16 | 19650 | 26333 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4380_22 | HRGMv2_4380_22_17 | 26417 | 26863 | - | 1.A.22.1.3 |
| TC | HRGMv2_4380_22 | HRGMv2_4380_22_18 | 27080 | 27772 | - | 1.A.8.3.1 |
Gene ID: HRGMv2_4380_22_14
Type: CAZyme
Location: 17045 - 18346 (-)
Type: CAZyme
Location: 17045 - 18346 (-)
Gene ID: HRGMv2_4380_22_15
Type: TF
Location: 18561 - 19460 (-)
Type: TF
Location: 18561 - 19460 (-)
Gene ID: HRGMv2_4380_22_16
Type:
Location: 19650 - 26333 (+)
Type:
Location: 19650 - 26333 (+)
Gene ID: HRGMv2_4380_22_17
Type: TC
Location: 26417 - 26863 (-)
Type: TC
Location: 26417 - 26863 (-)
Gene ID: HRGMv2_4380_22_18
Type: TC
Location: 27080 - 27772 (-)
Type: TC
Location: 27080 - 27772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.