Cluster: HRGMv2_4380_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_1 | HRGMv2_4380_1_132 | 185322 | 186452 | + | GT28 |
| peptidase | HRGMv2_4380_1 | HRGMv2_4380_1_133 | 186694 | 189348 | + | C01.UPA |
| TF | HRGMv2_4380_1 | HRGMv2_4380_1_134 | 189688 | 190134 | + | MarR |
| TC | HRGMv2_4380_1 | HRGMv2_4380_1_135 | 190173 | 191903 | + | 3.A.1.135.5 |
| TC | HRGMv2_4380_1 | HRGMv2_4380_1_136 | 191905 | 193830 | + | 3.A.1.135.5 |
| TC | HRGMv2_4380_1 | HRGMv2_4380_1_137 | 193971 | 194546 | + | 1.E.14.1.17 |
| TC | HRGMv2_4380_1 | HRGMv2_4380_1_138 | 194610 | 195305 | + | 2.A.122.1.7 |
Gene ID: HRGMv2_4380_1_132
Type: CAZyme
Location: 185322 - 186452 (+)
Type: CAZyme
Location: 185322 - 186452 (+)
Gene ID: HRGMv2_4380_1_133
Type: peptidase
Location: 186694 - 189348 (+)
Type: peptidase
Location: 186694 - 189348 (+)
Gene ID: HRGMv2_4380_1_134
Type: TF
Location: 189688 - 190134 (+)
Type: TF
Location: 189688 - 190134 (+)
Gene ID: HRGMv2_4380_1_135
Type: TC
Location: 190173 - 191903 (+)
Type: TC
Location: 190173 - 191903 (+)
Gene ID: HRGMv2_4380_1_136
Type: TC
Location: 191905 - 193830 (+)
Type: TC
Location: 191905 - 193830 (+)
Gene ID: HRGMv2_4380_1_137
Type: TC
Location: 193971 - 194546 (+)
Type: TC
Location: 193971 - 194546 (+)
Gene ID: HRGMv2_4380_1_138
Type: TC
Location: 194610 - 195305 (+)
Type: TC
Location: 194610 - 195305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.