Cluster: HRGMv2_4380_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- CGC Family ID: CGCFAM_03634
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_21 | HRGMv2_4380_21_14 | 14705 | 15949 | + | GT2 |
| STP | HRGMv2_4380_21 | HRGMv2_4380_21_15 | 15967 | 17793 | + | SIS | SIS |
| NULL(UNKNOWN) | HRGMv2_4380_21 | HRGMv2_4380_21_16 | 18022 | 18165 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4380_21 | HRGMv2_4380_21_17 | 18290 | 19639 | + | 9.A.40.2.1 |
Gene ID: HRGMv2_4380_21_14
Type: CAZyme
Location: 14705 - 15949 (+)
Type: CAZyme
Location: 14705 - 15949 (+)
Gene ID: HRGMv2_4380_21_15
Type: STP
Location: 15967 - 17793 (+)
Type: STP
Location: 15967 - 17793 (+)
Gene ID: HRGMv2_4380_21_16
Type:
Location: 18022 - 18165 (+)
Type:
Location: 18022 - 18165 (+)
Gene ID: HRGMv2_4380_21_17
Type: TC
Location: 18290 - 19639 (+)
Type: TC
Location: 18290 - 19639 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.