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Cluster: HRGMv2_4380_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4380_20 HRGMv2_4380_20_1 128 3544 + GH5_4
NULL(UNKNOWN) HRGMv2_4380_20 HRGMv2_4380_20_2 3738 4685 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4380_20 HRGMv2_4380_20_3 4930 6384 + 3.A.11.1.4
pfam HRGMv2_4380_20 HRGMv2_4380_20_4 6413 6631 + DUF3006
pfam HRGMv2_4380_20 HRGMv2_4380_20_5 6902 9379 + UvrA_DNA-bind
CAZyme HRGMv2_4380_20 HRGMv2_4380_20_6 9536 12454 - PL1
pfam HRGMv2_4380_20 HRGMv2_4380_20_7 12942 13250 - SLH
CAZyme HRGMv2_4380_20 HRGMv2_4380_20_8 14000 15313 + GH13_20
Gene ID: HRGMv2_4380_20_1
Type: CAZyme
Location: 128 - 3544 (+)
Gene ID: HRGMv2_4380_20_2
Type:
Location: 3738 - 4685 (-)
Gene ID: HRGMv2_4380_20_3
Type: TC
Location: 4930 - 6384 (+)
Gene ID: HRGMv2_4380_20_4
Type: pfam
Location: 6413 - 6631 (+)
Gene ID: HRGMv2_4380_20_5
Type: pfam
Location: 6902 - 9379 (+)
Gene ID: HRGMv2_4380_20_6
Type: CAZyme
Location: 9536 - 12454 (-)
Gene ID: HRGMv2_4380_20_7
Type: pfam
Location: 12942 - 13250 (-)
Gene ID: HRGMv2_4380_20_8
Type: CAZyme
Location: 14000 - 15313 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Roslinia
→
Species
Roslinia caecavium

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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