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Cluster: HRGMv2_4380_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4380_19 HRGMv2_4380_19_1 2 1048 - PL1_2
peptidase HRGMv2_4380_19 HRGMv2_4380_19_2 1497 3110 - S01.UPC
CAZyme HRGMv2_4380_19 HRGMv2_4380_19_3 3528 7991 - PL1_2
CAZyme HRGMv2_4380_19 HRGMv2_4380_19_4 8390 9943 - GH39
STP HRGMv2_4380_19 HRGMv2_4380_19_5 10336 11913 - SBP_bac_1
TC HRGMv2_4380_19 HRGMv2_4380_19_6 12049 12933 - 3.A.1.1.29
TC HRGMv2_4380_19 HRGMv2_4380_19_7 12954 13931 - 3.A.1.1.29
TF HRGMv2_4380_19 HRGMv2_4380_19_8 14669 15922 + HTH_AraC
CAZyme HRGMv2_4380_19 HRGMv2_4380_19_9 16099 18477 - GH106
Gene ID: HRGMv2_4380_19_1
Type: CAZyme
Location: 2 - 1048 (-)
Gene ID: HRGMv2_4380_19_2
Type: peptidase
Location: 1497 - 3110 (-)
Gene ID: HRGMv2_4380_19_3
Type: CAZyme
Location: 3528 - 7991 (-)
Gene ID: HRGMv2_4380_19_4
Type: CAZyme
Location: 8390 - 9943 (-)
Gene ID: HRGMv2_4380_19_5
Type: STP
Location: 10336 - 11913 (-)
Gene ID: HRGMv2_4380_19_6
Type: TC
Location: 12049 - 12933 (-)
Gene ID: HRGMv2_4380_19_7
Type: TC
Location: 12954 - 13931 (-)
Gene ID: HRGMv2_4380_19_8
Type: TF
Location: 14669 - 15922 (+)
Gene ID: HRGMv2_4380_19_9
Type: CAZyme
Location: 16099 - 18477 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Roslinia
→
Species
Roslinia caecavium

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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