Cluster: HRGMv2_4380_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_18 | HRGMv2_4380_18_27 | 29243 | 30271 | - | CE4 |
| TF | HRGMv2_4380_18 | HRGMv2_4380_18_28 | 30585 | 31103 | + | MarR |
| TC | HRGMv2_4380_18 | HRGMv2_4380_18_29 | 31129 | 32868 | + | 3.A.1.135.5 |
| TC | HRGMv2_4380_18 | HRGMv2_4380_18_30 | 32861 | 34678 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4380_18_27
Type: CAZyme
Location: 29243 - 30271 (-)
Type: CAZyme
Location: 29243 - 30271 (-)
Gene ID: HRGMv2_4380_18_28
Type: TF
Location: 30585 - 31103 (+)
Type: TF
Location: 30585 - 31103 (+)
Gene ID: HRGMv2_4380_18_29
Type: TC
Location: 31129 - 32868 (+)
Type: TC
Location: 31129 - 32868 (+)
Gene ID: HRGMv2_4380_18_30
Type: TC
Location: 32861 - 34678 (+)
Type: TC
Location: 32861 - 34678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.