Cluster: HRGMv2_4380_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4380_15 | HRGMv2_4380_15_27 | 34137 | 36284 | + | 9.A.8.1.5 |
| pfam | HRGMv2_4380_15 | HRGMv2_4380_15_28 | 36755 | 37294 | + | SCP2 |
| CAZyme | HRGMv2_4380_15 | HRGMv2_4380_15_29 | 37602 | 41828 | - | CBM32 | GH43_24 | GH43_24 |
Gene ID: HRGMv2_4380_15_27
Type: TC
Location: 34137 - 36284 (+)
Type: TC
Location: 34137 - 36284 (+)
Gene ID: HRGMv2_4380_15_28
Type: pfam
Location: 36755 - 37294 (+)
Type: pfam
Location: 36755 - 37294 (+)
Gene ID: HRGMv2_4380_15_29
Type: CAZyme
Location: 37602 - 41828 (-)
Type: CAZyme
Location: 37602 - 41828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.