Cluster: HRGMv2_4380_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4380_15 | HRGMv2_4380_15_1 | 2 | 961 | - | 3.D.6.1.2 |
| CAZyme | HRGMv2_4380_15 | HRGMv2_4380_15_2 | 1058 | 2599 | - | CBM91 | GH43_10 |
| pfam | HRGMv2_4380_15 | HRGMv2_4380_15_3 | 2935 | 3291 | - | SpoVAC_SpoVAEB |
| TC | HRGMv2_4380_15 | HRGMv2_4380_15_4 | 3382 | 4428 | - | 9.A.11.1.1 |
| TC | HRGMv2_4380_15 | HRGMv2_4380_15_5 | 4717 | 5166 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_4380_15_1
Type: TC
Location: 2 - 961 (-)
Type: TC
Location: 2 - 961 (-)
Gene ID: HRGMv2_4380_15_2
Type: CAZyme
Location: 1058 - 2599 (-)
Type: CAZyme
Location: 1058 - 2599 (-)
Gene ID: HRGMv2_4380_15_3
Type: pfam
Location: 2935 - 3291 (-)
Type: pfam
Location: 2935 - 3291 (-)
Gene ID: HRGMv2_4380_15_4
Type: TC
Location: 3382 - 4428 (-)
Type: TC
Location: 3382 - 4428 (-)
Gene ID: HRGMv2_4380_15_5
Type: TC
Location: 4717 - 5166 (-)
Type: TC
Location: 4717 - 5166 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.