Cluster: HRGMv2_4380_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4380_13 | HRGMv2_4380_13_7 | 9712 | 12498 | - | PL1_2 |
| pfam | HRGMv2_4380_13 | HRGMv2_4380_13_8 | 12811 | 13977 | - | SLH | SLH |
| pfam | HRGMv2_4380_13 | HRGMv2_4380_13_9 | 14248 | 16629 | - | XFP | XFP_C | XFP_N |
| CAZyme | HRGMv2_4380_13 | HRGMv2_4380_13_10 | 17031 | 19325 | + | GT4 |
| TC | HRGMv2_4380_13 | HRGMv2_4380_13_11 | 19564 | 20397 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_4380_13_7
Type: CAZyme
Location: 9712 - 12498 (-)
Type: CAZyme
Location: 9712 - 12498 (-)
Gene ID: HRGMv2_4380_13_8
Type: pfam
Location: 12811 - 13977 (-)
Type: pfam
Location: 12811 - 13977 (-)
Gene ID: HRGMv2_4380_13_9
Type: pfam
Location: 14248 - 16629 (-)
Type: pfam
Location: 14248 - 16629 (-)
Gene ID: HRGMv2_4380_13_10
Type: CAZyme
Location: 17031 - 19325 (+)
Type: CAZyme
Location: 17031 - 19325 (+)
Gene ID: HRGMv2_4380_13_11
Type: TC
Location: 19564 - 20397 (-)
Type: TC
Location: 19564 - 20397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.