Cluster: HRGMv2_4380_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4380_9 | HRGMv2_4380_9_40 | 52082 | 52924 | + | 8.A.5.1.4 |
| pfam | HRGMv2_4380_9 | HRGMv2_4380_9_41 | 53332 | 53592 | + | Ribosomal_S20p |
| pfam | HRGMv2_4380_9 | HRGMv2_4380_9_42 | 53931 | 55139 | + | Enolase_C | Enolase_N |
| CAZyme | HRGMv2_4380_9 | HRGMv2_4380_9_43 | 55268 | 62629 | - | CE8 | SLH | SLH |
Gene ID: HRGMv2_4380_9_40
Type: TC
Location: 52082 - 52924 (+)
Type: TC
Location: 52082 - 52924 (+)
Gene ID: HRGMv2_4380_9_41
Type: pfam
Location: 53332 - 53592 (+)
Type: pfam
Location: 53332 - 53592 (+)
Gene ID: HRGMv2_4380_9_42
Type: pfam
Location: 53931 - 55139 (+)
Type: pfam
Location: 53931 - 55139 (+)
Gene ID: HRGMv2_4380_9_43
Type: CAZyme
Location: 55268 - 62629 (-)
Type: CAZyme
Location: 55268 - 62629 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.