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Cluster: HRGMv2_4380_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4380_9 HRGMv2_4380_9_15 16467 17999 - CBM91 | GH43_10
pfam HRGMv2_4380_9 HRGMv2_4380_9_16 18319 19734 - GD_AH_second | SAF | GD_AH_C
pfam HRGMv2_4380_9 HRGMv2_4380_9_17 20039 21409 - Mannitol_dh | Mannitol_dh_C
CAZyme HRGMv2_4380_9 HRGMv2_4380_9_18 21469 22947 - GH28
CAZyme HRGMv2_4380_9 HRGMv2_4380_9_19 23245 24153 - CE8
STP HRGMv2_4380_9 HRGMv2_4380_9_20 24724 26418 - SBP_bac_1
TC HRGMv2_4380_9 HRGMv2_4380_9_21 26445 27338 - 3.A.1.1.9
TC HRGMv2_4380_9 HRGMv2_4380_9_22 27358 28392 - 3.A.1.1.10
CAZyme HRGMv2_4380_9 HRGMv2_4380_9_23 28902 33458 - PL1_2
Gene ID: HRGMv2_4380_9_15
Type: CAZyme
Location: 16467 - 17999 (-)
Gene ID: HRGMv2_4380_9_16
Type: pfam
Location: 18319 - 19734 (-)
Gene ID: HRGMv2_4380_9_17
Type: pfam
Location: 20039 - 21409 (-)
Gene ID: HRGMv2_4380_9_18
Type: CAZyme
Location: 21469 - 22947 (-)
Gene ID: HRGMv2_4380_9_19
Type: CAZyme
Location: 23245 - 24153 (-)
Gene ID: HRGMv2_4380_9_20
Type: STP
Location: 24724 - 26418 (-)
Gene ID: HRGMv2_4380_9_21
Type: TC
Location: 26445 - 27338 (-)
Gene ID: HRGMv2_4380_9_22
Type: TC
Location: 27358 - 28392 (-)
Gene ID: HRGMv2_4380_9_23
Type: CAZyme
Location: 28902 - 33458 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Roslinia
→
Species
Roslinia caecavium

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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