Cluster: HRGMv2_4380_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4380_5 | HRGMv2_4380_5_69 | 80385 | 82271 | - | 3.A.3.6.10 |
| STP | HRGMv2_4380_5 | HRGMv2_4380_5_70 | 82406 | 82624 | - | HMA |
| TF | HRGMv2_4380_5 | HRGMv2_4380_5_71 | 82925 | 83287 | + | HTH_5 |
| TC | HRGMv2_4380_5 | HRGMv2_4380_5_72 | 83467 | 84879 | - | 2.A.66.1.32 |
| CAZyme | HRGMv2_4380_5 | HRGMv2_4380_5_73 | 85076 | 87055 | + | CBM91 | GH43_12 |
| CAZyme | HRGMv2_4380_5 | HRGMv2_4380_5_74 | 87269 | 90256 | + | PL1_2 |
| CAZyme | HRGMv2_4380_5 | HRGMv2_4380_5_75 | 90300 | 95159 | + | PL11_1 |
Gene ID: HRGMv2_4380_5_69
Type: TC
Location: 80385 - 82271 (-)
Type: TC
Location: 80385 - 82271 (-)
Gene ID: HRGMv2_4380_5_70
Type: STP
Location: 82406 - 82624 (-)
Type: STP
Location: 82406 - 82624 (-)
Gene ID: HRGMv2_4380_5_71
Type: TF
Location: 82925 - 83287 (+)
Type: TF
Location: 82925 - 83287 (+)
Gene ID: HRGMv2_4380_5_72
Type: TC
Location: 83467 - 84879 (-)
Type: TC
Location: 83467 - 84879 (-)
Gene ID: HRGMv2_4380_5_73
Type: CAZyme
Location: 85076 - 87055 (+)
Type: CAZyme
Location: 85076 - 87055 (+)
Gene ID: HRGMv2_4380_5_74
Type: CAZyme
Location: 87269 - 90256 (+)
Type: CAZyme
Location: 87269 - 90256 (+)
Gene ID: HRGMv2_4380_5_75
Type: CAZyme
Location: 90300 - 95159 (+)
Type: CAZyme
Location: 90300 - 95159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Roslinia
Species
Roslinia caecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.