Cluster: HRGMv2_4374_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_06139
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_11 | HRGMv2_4374_11_35 | 35476 | 38049 | + | 3.A.12.1.1 |
| CAZyme | HRGMv2_4374_11 | HRGMv2_4374_11_36 | 38237 | 39367 | + | GH88 |
| TC | HRGMv2_4374_11 | HRGMv2_4374_11_37 | 39443 | 40375 | + | 8.A.5.1.7 |
| pfam | HRGMv2_4374_11 | HRGMv2_4374_11_38 | 40424 | 40858 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 | Acetyltransf_10 |
| TC | HRGMv2_4374_11 | HRGMv2_4374_11_39 | 40888 | 42261 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_4374_11_35
Type: TC
Location: 35476 - 38049 (+)
Type: TC
Location: 35476 - 38049 (+)
Gene ID: HRGMv2_4374_11_36
Type: CAZyme
Location: 38237 - 39367 (+)
Type: CAZyme
Location: 38237 - 39367 (+)
Gene ID: HRGMv2_4374_11_37
Type: TC
Location: 39443 - 40375 (+)
Type: TC
Location: 39443 - 40375 (+)
Gene ID: HRGMv2_4374_11_38
Type: pfam
Location: 40424 - 40858 (+)
Type: pfam
Location: 40424 - 40858 (+)
Gene ID: HRGMv2_4374_11_39
Type: TC
Location: 40888 - 42261 (+)
Type: TC
Location: 40888 - 42261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.