Cluster: HRGMv2_4374_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_04778
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4374_10 | HRGMv2_4374_10_7 | 5597 | 6919 | - | GT2 |
| STP | HRGMv2_4374_10 | HRGMv2_4374_10_8 | 7453 | 9150 | + | Peptidase_M23 |
| NULL(UNKNOWN) | HRGMv2_4374_10 | HRGMv2_4374_10_9 | 9236 | 9409 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_10 | 9600 | 12227 | - | 4.A.2.1.17 |
| STP | HRGMv2_4374_10 | HRGMv2_4374_10_11 | 12544 | 13737 | + | Aminotran_1_2 |
| pfam | HRGMv2_4374_10 | HRGMv2_4374_10_12 | 13760 | 14761 | + | tRNA-synt_1b |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_13 | 14811 | 15938 | + | 9.B.146.1.4 |
| pfam | HRGMv2_4374_10 | HRGMv2_4374_10_14 | 15950 | 17101 | + | Epimerase_2 |
| NULL(UNKNOWN) | HRGMv2_4374_10 | HRGMv2_4374_10_15 | 17160 | 17471 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_16 | 17472 | 19454 | + | 3.A.2.2.2 |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_17 | 19500 | 19997 | + | 3.A.2.2.2 |
| pfam | HRGMv2_4374_10 | HRGMv2_4374_10_18 | 20043 | 20636 | + | vATP-synt_E |
| pfam | HRGMv2_4374_10 | HRGMv2_4374_10_19 | 20651 | 21643 | + | vATP-synt_AC39 |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_20 | 21636 | 21959 | + | 3.A.2.2.2 |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_21 | 22012 | 23781 | + | 3.A.2.2.2 |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_22 | 23783 | 25174 | + | 3.A.2.2.2 |
| TC | HRGMv2_4374_10 | HRGMv2_4374_10_23 | 25178 | 25843 | + | 3.A.2.2.2 |
Gene ID: HRGMv2_4374_10_7
Type: CAZyme
Location: 5597 - 6919 (-)
Type: CAZyme
Location: 5597 - 6919 (-)
Gene ID: HRGMv2_4374_10_8
Type: STP
Location: 7453 - 9150 (+)
Type: STP
Location: 7453 - 9150 (+)
Gene ID: HRGMv2_4374_10_9
Type:
Location: 9236 - 9409 (-)
Type:
Location: 9236 - 9409 (-)
Gene ID: HRGMv2_4374_10_10
Type: TC
Location: 9600 - 12227 (-)
Type: TC
Location: 9600 - 12227 (-)
Gene ID: HRGMv2_4374_10_11
Type: STP
Location: 12544 - 13737 (+)
Type: STP
Location: 12544 - 13737 (+)
Gene ID: HRGMv2_4374_10_12
Type: pfam
Location: 13760 - 14761 (+)
Type: pfam
Location: 13760 - 14761 (+)
Gene ID: HRGMv2_4374_10_13
Type: TC
Location: 14811 - 15938 (+)
Type: TC
Location: 14811 - 15938 (+)
Gene ID: HRGMv2_4374_10_14
Type: pfam
Location: 15950 - 17101 (+)
Type: pfam
Location: 15950 - 17101 (+)
Gene ID: HRGMv2_4374_10_15
Type:
Location: 17160 - 17471 (+)
Type:
Location: 17160 - 17471 (+)
Gene ID: HRGMv2_4374_10_16
Type: TC
Location: 17472 - 19454 (+)
Type: TC
Location: 17472 - 19454 (+)
Gene ID: HRGMv2_4374_10_17
Type: TC
Location: 19500 - 19997 (+)
Type: TC
Location: 19500 - 19997 (+)
Gene ID: HRGMv2_4374_10_18
Type: pfam
Location: 20043 - 20636 (+)
Type: pfam
Location: 20043 - 20636 (+)
Gene ID: HRGMv2_4374_10_19
Type: pfam
Location: 20651 - 21643 (+)
Type: pfam
Location: 20651 - 21643 (+)
Gene ID: HRGMv2_4374_10_20
Type: TC
Location: 21636 - 21959 (+)
Type: TC
Location: 21636 - 21959 (+)
Gene ID: HRGMv2_4374_10_21
Type: TC
Location: 22012 - 23781 (+)
Type: TC
Location: 22012 - 23781 (+)
Gene ID: HRGMv2_4374_10_22
Type: TC
Location: 23783 - 25174 (+)
Type: TC
Location: 23783 - 25174 (+)
Gene ID: HRGMv2_4374_10_23
Type: TC
Location: 25178 - 25843 (+)
Type: TC
Location: 25178 - 25843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.