Cluster: HRGMv2_4374_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4374_4 | HRGMv2_4374_4_53 | 46573 | 47934 | - | GH30_1 |
| TF | HRGMv2_4374_4 | HRGMv2_4374_4_54 | 48116 | 48541 | + | FUR |
| TC | HRGMv2_4374_4 | HRGMv2_4374_4_55 | 48555 | 49502 | + | 3.A.1.15.3 |
| TC | HRGMv2_4374_4 | HRGMv2_4374_4_56 | 49502 | 50212 | + | 3.A.1.15.1 |
| TC | HRGMv2_4374_4 | HRGMv2_4374_4_57 | 50232 | 51050 | + | 3.A.1.15.6 |
Gene ID: HRGMv2_4374_4_53
Type: CAZyme
Location: 46573 - 47934 (-)
Type: CAZyme
Location: 46573 - 47934 (-)
Gene ID: HRGMv2_4374_4_54
Type: TF
Location: 48116 - 48541 (+)
Type: TF
Location: 48116 - 48541 (+)
Gene ID: HRGMv2_4374_4_55
Type: TC
Location: 48555 - 49502 (+)
Type: TC
Location: 48555 - 49502 (+)
Gene ID: HRGMv2_4374_4_56
Type: TC
Location: 49502 - 50212 (+)
Type: TC
Location: 49502 - 50212 (+)
Gene ID: HRGMv2_4374_4_57
Type: TC
Location: 50232 - 51050 (+)
Type: TC
Location: 50232 - 51050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.