Cluster: HRGMv2_4374_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_02768
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_70 | HRGMv2_4374_70_10 | 4712 | 6331 | - | 3.A.1.135.5 |
| TC | HRGMv2_4374_70 | HRGMv2_4374_70_11 | 6328 | 8007 | - | 3.A.1.106.7 |
| CAZyme | HRGMv2_4374_70 | HRGMv2_4374_70_12 | 8246 | 9934 | + | PL33_2 |
Gene ID: HRGMv2_4374_70_10
Type: TC
Location: 4712 - 6331 (-)
Type: TC
Location: 4712 - 6331 (-)
Gene ID: HRGMv2_4374_70_11
Type: TC
Location: 6328 - 8007 (-)
Type: TC
Location: 6328 - 8007 (-)
Gene ID: HRGMv2_4374_70_12
Type: CAZyme
Location: 8246 - 9934 (+)
Type: CAZyme
Location: 8246 - 9934 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.