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Cluster: HRGMv2_4374_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4374_66 HRGMv2_4374_66_1 50 4285 + CBM32 | PL35
CAZyme HRGMv2_4374_66 HRGMv2_4374_66_2 4449 8675 + CBM32 | PL21
NULL(UNKNOWN) HRGMv2_4374_66 HRGMv2_4374_66_3 8693 9193 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4374_66 HRGMv2_4374_66_4 9354 10316 + 9.B.70.1.1
TC HRGMv2_4374_66 HRGMv2_4374_66_5 10310 10822 + 9.B.70.1.1
TC HRGMv2_4374_66 HRGMv2_4374_66_6 10835 11029 + 9.B.70.1.1
TC HRGMv2_4374_66 HRGMv2_4374_66_7 11041 11427 + 9.B.70.1.1
TC HRGMv2_4374_66 HRGMv2_4374_66_8 11471 12604 + 9.B.70.1.1
Gene ID: HRGMv2_4374_66_1
Type: CAZyme
Location: 50 - 4285 (+)
Gene ID: HRGMv2_4374_66_2
Type: CAZyme
Location: 4449 - 8675 (+)
Gene ID: HRGMv2_4374_66_3
Type:
Location: 8693 - 9193 (+)
Gene ID: HRGMv2_4374_66_4
Type: TC
Location: 9354 - 10316 (+)
Gene ID: HRGMv2_4374_66_5
Type: TC
Location: 10310 - 10822 (+)
Gene ID: HRGMv2_4374_66_6
Type: TC
Location: 10835 - 11029 (+)
Gene ID: HRGMv2_4374_66_7
Type: TC
Location: 11041 - 11427 (+)
Gene ID: HRGMv2_4374_66_8
Type: TC
Location: 11471 - 12604 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UMGS1253
→
Genus
Aphodoplasma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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