Cluster: HRGMv2_4374_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_56 | HRGMv2_4374_56_2 | 819 | 1547 | - | 3.A.1.131.1 |
| NULL(UNKNOWN) | HRGMv2_4374_56 | HRGMv2_4374_56_3 | 1576 | 1884 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4374_56 | HRGMv2_4374_56_4 | 1886 | 2431 | - | NAGPA |
| CAZyme | HRGMv2_4374_56 | HRGMv2_4374_56_5 | 2560 | 3687 | - | GT2 |
| STP | HRGMv2_4374_56 | HRGMv2_4374_56_6 | 3909 | 4934 | + | HATPase_c | Response_reg |
| TC | HRGMv2_4374_56 | HRGMv2_4374_56_7 | 5086 | 6060 | + | 9.B.160.1.10 |
Gene ID: HRGMv2_4374_56_2
Type: TC
Location: 819 - 1547 (-)
Type: TC
Location: 819 - 1547 (-)
Gene ID: HRGMv2_4374_56_3
Type:
Location: 1576 - 1884 (-)
Type:
Location: 1576 - 1884 (-)
Gene ID: HRGMv2_4374_56_4
Type: pfam
Location: 1886 - 2431 (-)
Type: pfam
Location: 1886 - 2431 (-)
Gene ID: HRGMv2_4374_56_5
Type: CAZyme
Location: 2560 - 3687 (-)
Type: CAZyme
Location: 2560 - 3687 (-)
Gene ID: HRGMv2_4374_56_6
Type: STP
Location: 3909 - 4934 (+)
Type: STP
Location: 3909 - 4934 (+)
Gene ID: HRGMv2_4374_56_7
Type: TC
Location: 5086 - 6060 (+)
Type: TC
Location: 5086 - 6060 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.