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Cluster: HRGMv2_4374_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4374_49 HRGMv2_4374_49_3 1590 2330 + 3.A.1.122.2
pfam HRGMv2_4374_49 HRGMv2_4374_49_4 2348 3160 + PHP
pfam HRGMv2_4374_49 HRGMv2_4374_49_5 3173 3613 + Acetyltransf_1 | FR47 | Acetyltransf_6 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_4374_49 HRGMv2_4374_49_6 3698 5725 - GH164
CAZyme HRGMv2_4374_49 HRGMv2_4374_49_7 5906 7105 + GH37
TC HRGMv2_4374_49 HRGMv2_4374_49_8 7124 7987 - 9.B.126.2.7
Gene ID: HRGMv2_4374_49_3
Type: TC
Location: 1590 - 2330 (+)
Gene ID: HRGMv2_4374_49_4
Type: pfam
Location: 2348 - 3160 (+)
Gene ID: HRGMv2_4374_49_5
Type: pfam
Location: 3173 - 3613 (+)
Gene ID: HRGMv2_4374_49_6
Type: CAZyme
Location: 3698 - 5725 (-)
Gene ID: HRGMv2_4374_49_7
Type: CAZyme
Location: 5906 - 7105 (+)
Gene ID: HRGMv2_4374_49_8
Type: TC
Location: 7124 - 7987 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UMGS1253
→
Genus
Aphodoplasma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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