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Cluster: HRGMv2_4374_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4374_3 HRGMv2_4374_3_29 37724 39139 - 3.B.1.1.6
TC HRGMv2_4374_3 HRGMv2_4374_3_30 39185 40447 - 3.B.1.1.3
TC HRGMv2_4374_3 HRGMv2_4374_3_31 40488 40868 - 3.B.1.1.3
pfam HRGMv2_4374_3 HRGMv2_4374_3_32 40924 41238 - OAD_gamma
TC HRGMv2_4374_3 HRGMv2_4374_3_33 41258 42823 - 3.B.1.1.5
NULL(UNKNOWN) HRGMv2_4374_3 HRGMv2_4374_3_34 42978 43355 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4374_3 HRGMv2_4374_3_35 43358 44098 - PseudoU_synth_2 | S4
CAZyme HRGMv2_4374_3 HRGMv2_4374_3_36 44295 48398 - CBM32 | PL21
Gene ID: HRGMv2_4374_3_29
Type: TC
Location: 37724 - 39139 (-)
Gene ID: HRGMv2_4374_3_30
Type: TC
Location: 39185 - 40447 (-)
Gene ID: HRGMv2_4374_3_31
Type: TC
Location: 40488 - 40868 (-)
Gene ID: HRGMv2_4374_3_32
Type: pfam
Location: 40924 - 41238 (-)
Gene ID: HRGMv2_4374_3_33
Type: TC
Location: 41258 - 42823 (-)
Gene ID: HRGMv2_4374_3_34
Type:
Location: 42978 - 43355 (-)
Gene ID: HRGMv2_4374_3_35
Type: pfam
Location: 43358 - 44098 (-)
Gene ID: HRGMv2_4374_3_36
Type: CAZyme
Location: 44295 - 48398 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UMGS1253
→
Genus
Aphodoplasma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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