Cluster: HRGMv2_4374_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_10118
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4374_45 | HRGMv2_4374_45_10 | 9648 | 12809 | - | PL21 |
| TC | HRGMv2_4374_45 | HRGMv2_4374_45_11 | 12926 | 14713 | - | 3.A.1.106.3 |
| TC | HRGMv2_4374_45 | HRGMv2_4374_45_12 | 14703 | 16472 | - | 3.A.1.106.3 |
| TC | HRGMv2_4374_45 | HRGMv2_4374_45_13 | 16719 | 17363 | + | 2.A.107.3.1 |
| TC | HRGMv2_4374_45 | HRGMv2_4374_45_14 | 17379 | 19025 | - | 2.A.36.6.11 |
Gene ID: HRGMv2_4374_45_10
Type: CAZyme
Location: 9648 - 12809 (-)
Type: CAZyme
Location: 9648 - 12809 (-)
Gene ID: HRGMv2_4374_45_11
Type: TC
Location: 12926 - 14713 (-)
Type: TC
Location: 12926 - 14713 (-)
Gene ID: HRGMv2_4374_45_12
Type: TC
Location: 14703 - 16472 (-)
Type: TC
Location: 14703 - 16472 (-)
Gene ID: HRGMv2_4374_45_13
Type: TC
Location: 16719 - 17363 (+)
Type: TC
Location: 16719 - 17363 (+)
Gene ID: HRGMv2_4374_45_14
Type: TC
Location: 17379 - 19025 (-)
Type: TC
Location: 17379 - 19025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.