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Cluster: HRGMv2_4374_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4374_41 HRGMv2_4374_41_1 255 809 - 2.A.107.1.2
TF HRGMv2_4374_41 HRGMv2_4374_41_2 875 1765 - HTH_AraC | HTH_AraC
pfam HRGMv2_4374_41 HRGMv2_4374_41_3 1922 3022 + APH
TC HRGMv2_4374_41 HRGMv2_4374_41_4 3239 3799 + 2.A.107.1.2
CAZyme HRGMv2_4374_41 HRGMv2_4374_41_5 3832 4605 - CE4
sulfatase HRGMv2_4374_41 HRGMv2_4374_41_6 4741 5946 - S1_14
pfam HRGMv2_4374_41 HRGMv2_4374_41_7 6013 6912 - Radical_SAM | Fer4_12
TC HRGMv2_4374_41 HRGMv2_4374_41_8 7036 7956 + 3.A.11.1.4
TC HRGMv2_4374_41 HRGMv2_4374_41_9 7969 9480 - 2.A.35.2.1
pfam HRGMv2_4374_41 HRGMv2_4374_41_10 9505 9987 - Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_4374_41 HRGMv2_4374_41_11 10133 10708 - HAD
TC HRGMv2_4374_41 HRGMv2_4374_41_12 10808 12160 - 2.A.66.1.26
TC HRGMv2_4374_41 HRGMv2_4374_41_13 12292 12828 - 3.A.1.25.4
Gene ID: HRGMv2_4374_41_1
Type: TC
Location: 255 - 809 (-)
Gene ID: HRGMv2_4374_41_2
Type: TF
Location: 875 - 1765 (-)
Gene ID: HRGMv2_4374_41_3
Type: pfam
Location: 1922 - 3022 (+)
Gene ID: HRGMv2_4374_41_4
Type: TC
Location: 3239 - 3799 (+)
Gene ID: HRGMv2_4374_41_5
Type: CAZyme
Location: 3832 - 4605 (-)
Gene ID: HRGMv2_4374_41_6
Type: sulfatase
Location: 4741 - 5946 (-)
Gene ID: HRGMv2_4374_41_7
Type: pfam
Location: 6013 - 6912 (-)
Gene ID: HRGMv2_4374_41_8
Type: TC
Location: 7036 - 7956 (+)
Gene ID: HRGMv2_4374_41_9
Type: TC
Location: 7969 - 9480 (-)
Gene ID: HRGMv2_4374_41_10
Type: pfam
Location: 9505 - 9987 (-)
Gene ID: HRGMv2_4374_41_11
Type: pfam
Location: 10133 - 10708 (-)
Gene ID: HRGMv2_4374_41_12
Type: TC
Location: 10808 - 12160 (-)
Gene ID: HRGMv2_4374_41_13
Type: TC
Location: 12292 - 12828 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UMGS1253
→
Genus
Aphodoplasma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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