Cluster: HRGMv2_4374_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_38 | HRGMv2_4374_38_3 | 7290 | 9107 | - | 3.A.25.2.1 |
| NULL(UNKNOWN) | HRGMv2_4374_38 | HRGMv2_4374_38_4 | 9100 | 9552 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4374_38 | HRGMv2_4374_38_5 | 9845 | 10387 | + | DUF308 | DUF308 | DUF308 |
| CAZyme | HRGMv2_4374_38 | HRGMv2_4374_38_6 | 10371 | 11219 | + | GT8 |
Gene ID: HRGMv2_4374_38_3
Type: TC
Location: 7290 - 9107 (-)
Type: TC
Location: 7290 - 9107 (-)
Gene ID: HRGMv2_4374_38_4
Type:
Location: 9100 - 9552 (-)
Type:
Location: 9100 - 9552 (-)
Gene ID: HRGMv2_4374_38_5
Type: pfam
Location: 9845 - 10387 (+)
Type: pfam
Location: 9845 - 10387 (+)
Gene ID: HRGMv2_4374_38_6
Type: CAZyme
Location: 10371 - 11219 (+)
Type: CAZyme
Location: 10371 - 11219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.