Cluster: HRGMv2_4374_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_07265
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_37 | HRGMv2_4374_37_9 | 9488 | 10657 | + | 2.A.4.7.6 |
| pfam | HRGMv2_4374_37 | HRGMv2_4374_37_10 | 10669 | 12207 | + | Cu_amine_oxidN1 | WG_beta_rep | WG_beta_rep | WG_beta_rep |
| STP | HRGMv2_4374_37 | HRGMv2_4374_37_11 | 12227 | 13579 | + | HD |
| CAZyme | HRGMv2_4374_37 | HRGMv2_4374_37_12 | 13590 | 15653 | + | GH42 |
Gene ID: HRGMv2_4374_37_9
Type: TC
Location: 9488 - 10657 (+)
Type: TC
Location: 9488 - 10657 (+)
Gene ID: HRGMv2_4374_37_10
Type: pfam
Location: 10669 - 12207 (+)
Type: pfam
Location: 10669 - 12207 (+)
Gene ID: HRGMv2_4374_37_11
Type: STP
Location: 12227 - 13579 (+)
Type: STP
Location: 12227 - 13579 (+)
Gene ID: HRGMv2_4374_37_12
Type: CAZyme
Location: 13590 - 15653 (+)
Type: CAZyme
Location: 13590 - 15653 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.