Cluster: HRGMv2_4374_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4374_35 | HRGMv2_4374_35_3 | 1884 | 3017 | - | CE9 |
| pfam | HRGMv2_4374_35 | HRGMv2_4374_35_4 | 3033 | 4322 | - | MFS_1 |
| pfam | HRGMv2_4374_35 | HRGMv2_4374_35_5 | 4434 | 4634 | - | DUF1858 |
| TC | HRGMv2_4374_35 | HRGMv2_4374_35_6 | 4631 | 6673 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_4374_35_3
Type: CAZyme
Location: 1884 - 3017 (-)
Type: CAZyme
Location: 1884 - 3017 (-)
Gene ID: HRGMv2_4374_35_4
Type: pfam
Location: 3033 - 4322 (-)
Type: pfam
Location: 3033 - 4322 (-)
Gene ID: HRGMv2_4374_35_5
Type: pfam
Location: 4434 - 4634 (-)
Type: pfam
Location: 4434 - 4634 (-)
Gene ID: HRGMv2_4374_35_6
Type: TC
Location: 4631 - 6673 (-)
Type: TC
Location: 4631 - 6673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.