Cluster: HRGMv2_4374_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_05557
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_33 | HRGMv2_4374_33_20 | 20713 | 21585 | + | 2.A.7.3.65 |
| pfam | HRGMv2_4374_33 | HRGMv2_4374_33_21 | 21582 | 22127 | - | Metallophos | Metallophos_2 |
| NULL(UNKNOWN) | HRGMv2_4374_33 | HRGMv2_4374_33_22 | 22152 | 22610 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4374_33 | HRGMv2_4374_33_23 | 22777 | 23562 | + | CE4 |
Gene ID: HRGMv2_4374_33_20
Type: TC
Location: 20713 - 21585 (+)
Type: TC
Location: 20713 - 21585 (+)
Gene ID: HRGMv2_4374_33_21
Type: pfam
Location: 21582 - 22127 (-)
Type: pfam
Location: 21582 - 22127 (-)
Gene ID: HRGMv2_4374_33_22
Type:
Location: 22152 - 22610 (-)
Type:
Location: 22152 - 22610 (-)
Gene ID: HRGMv2_4374_33_23
Type: CAZyme
Location: 22777 - 23562 (+)
Type: CAZyme
Location: 22777 - 23562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.