Cluster: HRGMv2_4374_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4374
- CGC Family ID: CGCFAM_00387
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4374_23 | HRGMv2_4374_23_2 | 1606 | 3336 | - | 3.A.1.21.1 |
| TC | HRGMv2_4374_23 | HRGMv2_4374_23_3 | 3333 | 5111 | - | 3.A.1.21.1 |
| STP | HRGMv2_4374_23 | HRGMv2_4374_23_4 | 5186 | 5803 | - | TetR_N |
| CAZyme | HRGMv2_4374_23 | HRGMv2_4374_23_5 | 5977 | 8034 | - | GH42 |
Gene ID: HRGMv2_4374_23_2
Type: TC
Location: 1606 - 3336 (-)
Type: TC
Location: 1606 - 3336 (-)
Gene ID: HRGMv2_4374_23_3
Type: TC
Location: 3333 - 5111 (-)
Type: TC
Location: 3333 - 5111 (-)
Gene ID: HRGMv2_4374_23_4
Type: STP
Location: 5186 - 5803 (-)
Type: STP
Location: 5186 - 5803 (-)
Gene ID: HRGMv2_4374_23_5
Type: CAZyme
Location: 5977 - 8034 (-)
Type: CAZyme
Location: 5977 - 8034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.