Cluster: HRGMv2_4374_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4374_3 | HRGMv2_4374_3_2 | 620 | 1639 | - | GH179 |
| CAZyme | HRGMv2_4374_3 | HRGMv2_4374_3_3 | 1673 | 3199 | - | GH31_19 |
| pfam | HRGMv2_4374_3 | HRGMv2_4374_3_4 | 3299 | 4264 | - | AP_endonuc_2 |
| pfam | HRGMv2_4374_3 | HRGMv2_4374_3_5 | 4438 | 5586 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_4374_3 | HRGMv2_4374_3_6 | 5754 | 7610 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_4374_3_2
Type: CAZyme
Location: 620 - 1639 (-)
Type: CAZyme
Location: 620 - 1639 (-)
Gene ID: HRGMv2_4374_3_3
Type: CAZyme
Location: 1673 - 3199 (-)
Type: CAZyme
Location: 1673 - 3199 (-)
Gene ID: HRGMv2_4374_3_4
Type: pfam
Location: 3299 - 4264 (-)
Type: pfam
Location: 3299 - 4264 (-)
Gene ID: HRGMv2_4374_3_5
Type: pfam
Location: 4438 - 5586 (-)
Type: pfam
Location: 4438 - 5586 (-)
Gene ID: HRGMv2_4374_3_6
Type: TC
Location: 5754 - 7610 (-)
Type: TC
Location: 5754 - 7610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.