Cluster: HRGMv2_4373_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_00477
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_49 | HRGMv2_4373_49_3 | 2710 | 4059 | + | 2.A.66.1.33 |
| pfam | HRGMv2_4373_49 | HRGMv2_4373_49_4 | 4082 | 5311 | + | MFS_1 |
| CAZyme | HRGMv2_4373_49 | HRGMv2_4373_49_5 | 5360 | 6601 | - | GH3 |
| CAZyme | HRGMv2_4373_49 | HRGMv2_4373_49_6 | 6925 | 8892 | + | GH28 |
Gene ID: HRGMv2_4373_49_3
Type: TC
Location: 2710 - 4059 (+)
Type: TC
Location: 2710 - 4059 (+)
Gene ID: HRGMv2_4373_49_4
Type: pfam
Location: 4082 - 5311 (+)
Type: pfam
Location: 4082 - 5311 (+)
Gene ID: HRGMv2_4373_49_5
Type: CAZyme
Location: 5360 - 6601 (-)
Type: CAZyme
Location: 5360 - 6601 (-)
Gene ID: HRGMv2_4373_49_6
Type: CAZyme
Location: 6925 - 8892 (+)
Type: CAZyme
Location: 6925 - 8892 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.