Cluster: HRGMv2_4373_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_00232
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_48 | HRGMv2_4373_48_1 | 3 | 671 | + | 3.A.1.1.29 |
| pfam | HRGMv2_4373_48 | HRGMv2_4373_48_2 | 733 | 2436 | + | SLH | SLH | SLH |
| pfam | HRGMv2_4373_48 | HRGMv2_4373_48_3 | 2542 | 5382 | + | SLH |
| CAZyme | HRGMv2_4373_48 | HRGMv2_4373_48_4 | 5499 | 7280 | + | CE12 |
Gene ID: HRGMv2_4373_48_1
Type: TC
Location: 3 - 671 (+)
Type: TC
Location: 3 - 671 (+)
Gene ID: HRGMv2_4373_48_2
Type: pfam
Location: 733 - 2436 (+)
Type: pfam
Location: 733 - 2436 (+)
Gene ID: HRGMv2_4373_48_3
Type: pfam
Location: 2542 - 5382 (+)
Type: pfam
Location: 2542 - 5382 (+)
Gene ID: HRGMv2_4373_48_4
Type: CAZyme
Location: 5499 - 7280 (+)
Type: CAZyme
Location: 5499 - 7280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.