Cluster: HRGMv2_4373_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_03819
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4373_35 | HRGMv2_4373_35_5 | 6375 | 7691 | - | GH4 |
| TF | HRGMv2_4373_35 | HRGMv2_4373_35_6 | 7875 | 8666 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4373_35 | HRGMv2_4373_35_7 | 8880 | 9566 | + | 3.A.1.3.15 |
| TC | HRGMv2_4373_35 | HRGMv2_4373_35_8 | 9584 | 10312 | + | 3.A.1.3.15 |
| TC | HRGMv2_4373_35 | HRGMv2_4373_35_9 | 10459 | 11169 | + | 3.A.1.3.27 |
Gene ID: HRGMv2_4373_35_5
Type: CAZyme
Location: 6375 - 7691 (-)
Type: CAZyme
Location: 6375 - 7691 (-)
Gene ID: HRGMv2_4373_35_6
Type: TF
Location: 7875 - 8666 (+)
Type: TF
Location: 7875 - 8666 (+)
Gene ID: HRGMv2_4373_35_7
Type: TC
Location: 8880 - 9566 (+)
Type: TC
Location: 8880 - 9566 (+)
Gene ID: HRGMv2_4373_35_8
Type: TC
Location: 9584 - 10312 (+)
Type: TC
Location: 9584 - 10312 (+)
Gene ID: HRGMv2_4373_35_9
Type: TC
Location: 10459 - 11169 (+)
Type: TC
Location: 10459 - 11169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.