Cluster: HRGMv2_4373_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4373_27 | HRGMv2_4373_27_1 | 2 | 931 | + | CE12 |
| CAZyme | HRGMv2_4373_27 | HRGMv2_4373_27_2 | 1122 | 9173 | + | GH39 |
| CAZyme | HRGMv2_4373_27 | HRGMv2_4373_27_3 | 9467 | 10591 | + | GT4 |
| pfam | HRGMv2_4373_27 | HRGMv2_4373_27_4 | 10623 | 11735 | + | PS_pyruv_trans |
| TC | HRGMv2_4373_27 | HRGMv2_4373_27_5 | 11732 | 13048 | + | 2.A.66.4.5 |
Gene ID: HRGMv2_4373_27_1
Type: CAZyme
Location: 2 - 931 (+)
Type: CAZyme
Location: 2 - 931 (+)
Gene ID: HRGMv2_4373_27_2
Type: CAZyme
Location: 1122 - 9173 (+)
Type: CAZyme
Location: 1122 - 9173 (+)
Gene ID: HRGMv2_4373_27_3
Type: CAZyme
Location: 9467 - 10591 (+)
Type: CAZyme
Location: 9467 - 10591 (+)
Gene ID: HRGMv2_4373_27_4
Type: pfam
Location: 10623 - 11735 (+)
Type: pfam
Location: 10623 - 11735 (+)
Gene ID: HRGMv2_4373_27_5
Type: TC
Location: 11732 - 13048 (+)
Type: TC
Location: 11732 - 13048 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.