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Cluster: HRGMv2_4373_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4373_6 HRGMv2_4373_6_3 3700 4659 + GH29
STP HRGMv2_4373_6 HRGMv2_4373_6_4 4755 6308 - Pyr_redox_2
STP HRGMv2_4373_6 HRGMv2_4373_6_5 6324 7538 - Pyr_redox
TC HRGMv2_4373_6 HRGMv2_4373_6_6 7535 8674 - 2.A.86.1.11
pfam HRGMv2_4373_6 HRGMv2_4373_6_7 8774 10597 - SLH | SLH
TC HRGMv2_4373_6 HRGMv2_4373_6_8 10828 11547 - 3.A.11.1.4
NULL(UNKNOWN) HRGMv2_4373_6 HRGMv2_4373_6_9 11544 13010 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4373_6 HRGMv2_4373_6_10 13294 14583 + FAD_binding_2 | GIDA | FAD_oxidored | NAD_binding_8
CAZyme HRGMv2_4373_6 HRGMv2_4373_6_11 14869 15753 - CE4
CAZyme HRGMv2_4373_6 HRGMv2_4373_6_12 15898 16785 + CE4
Gene ID: HRGMv2_4373_6_3
Type: CAZyme
Location: 3700 - 4659 (+)
Gene ID: HRGMv2_4373_6_4
Type: STP
Location: 4755 - 6308 (-)
Gene ID: HRGMv2_4373_6_5
Type: STP
Location: 6324 - 7538 (-)
Gene ID: HRGMv2_4373_6_6
Type: TC
Location: 7535 - 8674 (-)
Gene ID: HRGMv2_4373_6_7
Type: pfam
Location: 8774 - 10597 (-)
Gene ID: HRGMv2_4373_6_8
Type: TC
Location: 10828 - 11547 (-)
Gene ID: HRGMv2_4373_6_9
Type:
Location: 11544 - 13010 (-)
Gene ID: HRGMv2_4373_6_10
Type: pfam
Location: 13294 - 14583 (+)
Gene ID: HRGMv2_4373_6_11
Type: CAZyme
Location: 14869 - 15753 (-)
Gene ID: HRGMv2_4373_6_12
Type: CAZyme
Location: 15898 - 16785 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
CAKSQL01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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