Cluster: HRGMv2_4373_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_00906
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_150 | HRGMv2_4373_150_6 | 2731 | 3384 | - | 9.B.149.1.11 |
| TF | HRGMv2_4373_150 | HRGMv2_4373_150_7 | 3731 | 4600 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4373_150 | HRGMv2_4373_150_8 | 4725 | 5567 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4373_150 | HRGMv2_4373_150_9 | 5597 | 6190 | + | GH179 |
Gene ID: HRGMv2_4373_150_6
Type: TC
Location: 2731 - 3384 (-)
Type: TC
Location: 2731 - 3384 (-)
Gene ID: HRGMv2_4373_150_7
Type: TF
Location: 3731 - 4600 (-)
Type: TF
Location: 3731 - 4600 (-)
Gene ID: HRGMv2_4373_150_8
Type: pfam
Location: 4725 - 5567 (+)
Type: pfam
Location: 4725 - 5567 (+)
Gene ID: HRGMv2_4373_150_9
Type: CAZyme
Location: 5597 - 6190 (+)
Type: CAZyme
Location: 5597 - 6190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.