Cluster: HRGMv2_4373_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_10600
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_125 | HRGMv2_4373_125_1 | 647 | 1492 | - | 3.A.1.15.10 |
| TC | HRGMv2_4373_125 | HRGMv2_4373_125_2 | 1515 | 2210 | - | 3.A.1.15.4 |
| pfam | HRGMv2_4373_125 | HRGMv2_4373_125_3 | 2241 | 3206 | - | ZnuA |
| TF | HRGMv2_4373_125 | HRGMv2_4373_125_4 | 3203 | 3622 | - | FUR |
| CAZyme | HRGMv2_4373_125 | HRGMv2_4373_125_5 | 3811 | 6603 | - | GH38 |
Gene ID: HRGMv2_4373_125_1
Type: TC
Location: 647 - 1492 (-)
Type: TC
Location: 647 - 1492 (-)
Gene ID: HRGMv2_4373_125_2
Type: TC
Location: 1515 - 2210 (-)
Type: TC
Location: 1515 - 2210 (-)
Gene ID: HRGMv2_4373_125_3
Type: pfam
Location: 2241 - 3206 (-)
Type: pfam
Location: 2241 - 3206 (-)
Gene ID: HRGMv2_4373_125_4
Type: TF
Location: 3203 - 3622 (-)
Type: TF
Location: 3203 - 3622 (-)
Gene ID: HRGMv2_4373_125_5
Type: CAZyme
Location: 3811 - 6603 (-)
Type: CAZyme
Location: 3811 - 6603 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.